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PDBe content

Which code lives at the PDBe?

The code at the PDBe is in an internal SVN repository. Contact for info.


The CCPN related code there covers:

  • Weekly CCPN ChemComp updates from the PDBe database
  • Autodep related code (starting from CCPN project, creating CCPN project from Autodep, ...)
  • Annotation code (checking coordinate files via CCPN import, ...)

Other code is available for:

  • PDBe NMR web server (Django)
  • Olderado code
  • Checking of mandatory shift files for wwPDB deposition
  • Code for getting data out of original RECOORD files
  • Code for weekly updates (combining data from different sources to get overview of info for all PDB NMR entries).